Site rpoS
- Name: rpoS
- Type: Gene
- Synonyms
abrD aidB regulator appR b2741 MG1655 locus tag dpeB Manna and Gowrishankar katF oxygen-induced stress nur - Mnemonic: RNA polymerase
- Left End Point: 61.75
- Right End Point: 61.77
- Products:
RNA polymerase sigma-stationary_phase Sigma 38 Sigma-S - Direction: <
- Properties:
Property Comment regulatory gene NULL - Priority: 1
- 5 Alleles of This Gene
rpoS1003 rpoS1270(del) rpoS1271(del) rpoS396(Am) rpoS746(del)::kan - External Database Links:
Host Site Page Links EcoGene.org EG10510 EcoliWiki rpoS - Comment:
- biosynthesis of catalase hydroperoxidase HPII (katE). sigma-70-like factor for stationary phase transcription. change name to rpoS. change allele nos. for katF genes.
- References:
- Conter, A, C Gangneux, M Suzanne, C Gutierrez . Survival of Escherichia coli during long-term starvation: effects of aeration, NaCl, and the rpoS and osmC gene products. Res. Microbiol. 152(1):17-26.
- Loewen, P.C., B.L. Triggs-Raine 1984. Genetic mapping of katF, a locus that with katE affects the synthesis of a second catalase species in Escherichia coli. J.Bacteriol. 160:668-675
- Sammartano, L.J., R.W. Tuveson, R. Davenport 1986. Control of sensitivity to inactivation by H202 and broadspectrum near-UV radiation by the Escherichia coli katF locus. J.Bacteriol. 168:13-21
- Touati, E., E. Dassa, P.L. Boquet 1986. Pleiotropic mutations in appR reduce pH 2.5 acid phosphatase expression and restore succinate utilization in CRP-deficient strains of Escherichia coli. Mol.Gen.Genet. 202:257-264
- Mulvey, M.R., P.A. Sorby, B.L. Triggs-Raine, P.C. Loewen 1988. Cloning and physical characterization of katE and katF required for catalase HPII expression of Escherichia coli. Gene 73:337-346
- Mulvey, M.R., P.C. Loewen 1989. Nucleotide sequence of katF of Escherichia coli suggests KatF protein is a novel transcription factor. Nucleic Acids Res. 17:9979-9991
- Sak, B.D., A. Eisenstark, D. Touati 1989. Exonuclease III and the catalase hydroperoxidase II in Escherichia coli are both regulated by the katF gene product. Proc.Natl.Acad.Sci.USA 86:3271-3275
- Touati, E., E. Dassa, J. Dassa, P.L. Boquet, D. Touati 1991. Are appR and katF the same Escherichia coli gene encoding a new sigma transcription initiation factor?. Res.Microbiol. 142:29-36
- Kaasen, I., P. Falkenberg, O.B. Styrvold, A.R. Strom 1992. Molecular cloning and physical mapping of the otsBA genes, which encode the osmoregulatory trehalose pathway of Escherichia coli: evidence that transcription is activated by katF (AppR). J.Bact
- Schellhorn, H.E., V.L. Stones 1992. Regulation of katF and katE in Escherichia coli K-12 by weak acids. J.Bacteriol. 174:4769-4776
- Gentry, D.R., V.J. Hernandez, L.H. Nguyen, D. Jensen, M. Cashel 1993. Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGpp. J.Bacteriol. 175:7982-7989
- Ishihama, A. 1993. Protein-protein communication within the transcription apparatus. J.Bacteriol. 175:2483-2489
- Volkert, M.R., L.I. Hajec, Z. Matijasevic, F.C. Fang, R. Prince 1994. Induction of the Escherichia coli aidB gene under oxygen-limiting conditions requires a functional rpoS (katF) gene. J.Bacteriol. 176:7638-7645
- Manna, D., J. Gowrishankar 1994. Evidence for involvement of proteins HU and RpoS in transcription of the osmoresponsive proU operon in Escherichia coli. J.Bacteriol. 176:5378-5384
- Lange, R., D. Fischer, R. Hengge-Aronis 1995. Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma-S subunit of RNA polymerase in Escherichia coli. J.Bacteriol. 177:4676-4680
- Talukder, A.A., S. Yanai, T. Nitta, A. Kato, M. Yamada 1996. RpoS-dependent regulation of genes expressed at late stationary phase in Escherichia coli. FEBS Lett. 386:177-180
- Pratt, L.A., T.J. Silhavy 1996. The response regulator SprE controls the stability of RpoS. Proc.Natl.Acad.Sci.USA 93:2488-2492
- Wise, A., R. Brems, V. Ramakrishnan, M. Villarejo 1996. Sequences in the -35 region of Escherichia coli rpoS-dependent genes promote transcription by E sigma S. J.Bacteriol. 178:2785-2793
- Tsui, H.C., G. Feng, M.E. Winkler 1997. Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12. J.Bacteriol. 179:7476-7487
- Visick, J., H. Cai, S. Clarke 1998. The L-isoaspartyl protein repair methyltransferase enhances survival of aging Escherichia coli subjected to secondary environmental stresses. J.Bacteriol. 180:2623-2629
- Rockabrand, D., K. Livers, T. Austin, R. Kaiser, D. Jensen, R. Burgess, P. Blum 1998. Roles of DnaK and RpoS in starvation-induced thermotolerance of Escherichia coli. J.Bacteriol. 180:846-854
- Ferguson, G.P., R.I. Creighton, Y. Nikolaev, I.R. Booth 1998. Importance of RpoS and Dps in survival of exposure of both exponential- and stationary-phase Escherichia coli cells to the electrophile N-ethylmaleimide. J.Bacteriol. 180:1030-1036
- Wei, B., S. Shin, D. LaPorte, A.J. Wolfe, T. Romeo 2000. Global regulatory mutations in csrA and rpoS cause severe central carbon stress in Escherichia coli in the presence of acetate. J.Bacteriol. 182:1632-1640
- Funabashi, H., T. Haruyama, M. Mie, Y. Yanagida, E. Kobatake, M. Aizawa 2002. Non-destructive monitoring of rpoS promoter activity as stress marker for evaluating cellular physiological status. Journal of Biotechnology 95:85-93